STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g70740DBnaC03g70740D protein. (643 aa)    
Predicted Functional Partners:
BnaA05g28560D
BnaA05g28560D protein.
      
 0.493
BnaC05g01190D
BnaC05g01190D protein.
      
 0.493
BnaA09g06360D
BnaA09g06360D protein.
      
 0.493
BnaA06g20440D
BnaA06g20440D protein.
      
 0.493
BnaC04g08410D
BnaC04g08410D protein.
      
 0.468
BnaA05g17240D
BnaA05g17240D protein.
    
 
 0.466
BnaC05g30180D
BnaC05g30180D protein.
    
 
 0.466
BnaAnng36300D
BnaAnng36300D protein.
    
 
 0.466
BnaC02g19130D
BnaC02g19130D protein.
      
 0.465
BnaC03g62490D
BnaC03g62490D protein.
      
 0.465
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.