STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g26510DBnaA02g26510D protein. (1217 aa)    
Predicted Functional Partners:
BnaA06g36120D
BnaA06g36120D protein; Belongs to the cullin family.
  
 0.956
BnaA09g17890D
BnaA09g17890D protein; Belongs to the cullin family.
  
 0.956
BnaA02g24350D
BnaA02g24350D protein; Belongs to the cullin family.
  
 0.956
BnaC09g37280D
BnaC09g37280D protein.
    
 0.945
BnaA02g04940D
BnaA02g04940D protein.
    
 0.945
BnaA03g56030D
BnaA03g56030D protein.
    
 0.945
BnaC09g15040D
BnaC09g15040D protein.
   
 0.944
BnaCnng78310D
BnaCnng78310D protein.
   
 0.944
BnaC06g12710D
BnaC06g12710D protein; Belongs to the cullin family.
   
 0.881
BnaA09g29300D
BnaA09g29300D protein; Belongs to the cullin family.
   
 0.881
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.