STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC09g43520DBnaC09g43520D protein. (319 aa)    
Predicted Functional Partners:
BnaC03g27570D
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
  
 0.987
BnaC08g43210D
BnaC08g43210D protein.
    
 0.966
BnaA08g27050D
BnaA08g27050D protein.
    
 0.966
BnaAnng28130D
BnaAnng28130D protein.
    
 0.966
BnaCnng14330D
BnaCnng14330D protein.
    
 0.964
BnaCnng14350D
BnaCnng14350D protein.
    
 0.964
BnaCnng27110D
BnaCnng27110D protein.
    
 0.964
BnaC05g40140D
BnaC05g40140D protein.
    
 0.962
BnaC05g40070D
BnaC05g40070D protein.
    
 0.962
BnaA05g26050D
BnaA05g26050D protein.
    
 0.962
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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