Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC08g43640DBnaC08g43640D protein. (149 aa)    
Predicted Functional Partners:
BnaC01g31820D
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.611
BnaA01g22440D
BnaA01g22440D protein.
      
 0.611
BnaC01g28660D
BnaC01g28660D protein.
      
 0.611
BnaC07g50550D
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.611
BnaAnng33710D
BnaAnng33710D protein.
  
     0.529
BnaA08g28380D
BnaA08g28380D protein.
      
 0.517
BnaC01g15000D
BnaC01g15000D protein.
  
     0.515
BnaA03g45970D
BnaA03g45970D protein.
  
     0.514
BnaA01g13050D
BnaA01g13050D protein.
  
     0.514
BnaA02g27400D
BnaA02g27400D protein.
  
     0.512
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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