Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng03870DBnaCnng03870D protein. (417 aa)    
Predicted Functional Partners:
BnaA03g53390D
BnaA03g53390D protein.
    
 0.922
BnaC04g24520D
BnaC04g24520D protein.
    
 0.919
BnaC04g06040D
BnaC04g06040D protein.
    
 0.897
BnaA05g34590D
BnaA05g34590D protein.
    
 0.897
BnaA02g16890D
Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.
    
 0.888
BnaA05g10670D
BnaA05g10670D protein.
   
 0.847
BnaC04g11730D
BnaC04g11730D protein.
   
 0.847
BnaC09g41770D
BnaC09g41770D protein.
   
 0.847
BnaA05g08920D
BnaA05g08920D protein.
   
 0.847
BnaC04g56080D
BnaC04g56080D protein.
   
 0.847
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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