STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g20050DProtein MAK16 homolog; Belongs to the MAK16 family. (303 aa)    
Predicted Functional Partners:
BnaC09g37260D
BnaC09g37260D protein.
   
 0.980
BnaA03g56090D
BnaA03g56090D protein.
   
 0.980
BnaA09g26910D
BnaA09g26910D protein.
   
 0.975
BnaAnng21410D
BnaAnng21410D protein.
   
 0.975
BnaC02g02640D
BnaC02g02640D protein.
   
 
 0.968
BnaC09g50690D
BnaC09g50690D protein.
   
 
 0.968
BnaC06g12970D
BnaC06g12970D protein.
   
   0.964
BnaA04g10330D
BnaA04g10330D protein.
   
   0.964
BnaAnng02790D
BnaAnng02790D protein.
   
 0.960
BnaA09g52220D
BnaA09g52220D protein.
   
 0.960
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.