STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g14210DBnaC03g14210D protein. (539 aa)    
Predicted Functional Partners:
BnaC03g70170D
BnaC03g70170D protein.
  
  
 0.861
BnaC05g39580D
BnaC05g39580D protein.
  
  
 0.861
BnaA06g34150D
BnaA06g34150D protein.
  
  
 0.860
BnaC04g29310D
BnaC04g29310D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.711
BnaC08g08850D
BnaC08g08850D protein.
  
  
 0.711
BnaAnng08940D
BnaAnng08940D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.711
BnaC01g41740D
BnaC01g41740D protein.
  
  
 0.711
BnaC03g29830D
BnaC03g29830D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.679
BnaC08g13740D
BnaC08g13740D protein.
  
 
 0.649
BnaC08g13750D
BnaC08g13750D protein.
  
 
 0.649
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.