STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA03g46450DBnaA03g46450D protein. (206 aa)    
Predicted Functional Partners:
BnaCnng10240D
BnaCnng10240D protein.
    
 0.954
BnaA04g13850D
BnaA04g13850D protein.
    
 0.913
BnaA09g41880D
BnaA09g41880D protein.
    
 0.913
BnaC04g56280D
BnaC04g56280D protein.
    
 0.913
BnaA04g13630D
BnaA04g13630D protein.
    
 0.901
BnaA02g11340D
BnaA02g11340D protein.
   
 0.897
BnaA10g10150D
BnaA10g10150D protein.
    
 0.897
BnaA09g00500D
BnaA09g00500D protein.
    
 0.897
BnaA03g13220D
BnaA03g13220D protein.
   
 0.897
BnaC08g43790D
BnaC08g43790D protein.
    
 0.868
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.