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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA05g12320DBnaA05g12320D protein; Belongs to the protein kinase superfamily. (498 aa)    
Predicted Functional Partners:
BnaC08g11760D
BnaC08g11760D protein.
    
  0.456
BnaA03g46880D
BnaA03g46880D protein.
    
  0.456
BnaA08g14650D
BnaA08g14650D protein.
    
  0.456
BnaA01g14050D
BnaA01g14050D protein.
    
  0.456
BnaA07g28640D
BnaA07g28640D protein.
  
 
  0.431
BnaC06g31220D
BnaC06g31220D protein.
  
 
  0.428
BnaC08g08960D
BnaC08g08960D protein; Belongs to the protein kinase superfamily.
  
 
  0.423
BnaC02g33070D
BnaC02g33070D protein; Belongs to the protein kinase superfamily.
  
 
  0.423
BnaCnng51670D
BnaCnng51670D protein; Belongs to the protein kinase superfamily.
  
 
  0.420
BnaA05g14660D
BnaA05g14660D protein.
  
 
0.419
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.