Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA05g11820DBnaA05g11820D protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (365 aa)    
Predicted Functional Partners:
BnaA09g20650D
BnaA09g20650D protein.
     
 0.706
BnaA05g32040D
BnaA05g32040D protein.
     
 0.706
BnaC05g46680D
BnaC05g46680D protein.
     
 0.706
BnaCnng69280D
BnaCnng69280D protein.
     
 0.674
BnaA07g04890D
BnaA07g04890D protein.
  
 
 
 0.653
GID1B
Gibberellin receptor 1B.
     
 0.571
BnaC03g41990D
BnaC03g41990D protein; Belongs to the protein kinase superfamily.
  
 
  0.439
BnaC04g56870D
BnaC04g56870D protein.
  
  0.429
BnaA06g15970D
BnaA06g15970D protein.
  
  0.425
BnaCnng14430D
BnaCnng14430D protein; Belongs to the protein kinase superfamily.
  
  0.418
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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