Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC01g14670DBnaC01g14670D protein. (380 aa)    
Predicted Functional Partners:
BnaA06g23050D
BnaA06g23050D protein.
     
 0.716
BnaA06g23110D
BnaA06g23110D protein.
     
 0.714
BnaA06g22680D
BnaA06g22680D protein; Belongs to the adenylate kinase family.
   
  
 0.709
BnaC01g15360D
Potassium transporter; Potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
   
  
 0.709
BnaA06g23120D
BnaA06g23120D protein.
      
 0.706
BnaA06g23220D
BnaA06g23220D protein; Belongs to the PI3/PI4-kinase family.
      
 0.706
BnaA06g22880D
Diacylglycerol kinase.
  
  
 0.529
BnaA06g22660D
Nucleoside diphosphate kinase.
    
 
 0.512
BnaA08g12200D
BnaA08g12200D protein.
  
     0.465
BnaC03g67300D
BnaC03g67300D protein.
  
     0.458
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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