STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA05g11270DBnaA05g11270D protein. (537 aa)    
Predicted Functional Partners:
BnaA09g03360D
BnaA09g03360D protein.
   
 0.599
BnaA06g20570D
BnaA06g20570D protein.
   
 0.540
BnaCnng15180D
BnaCnng15180D protein.
   
 0.540
BnaA09g02460D
BnaA09g02460D protein.
   
 0.535
BnaCnng49330D
BnaCnng49330D protein.
   
 0.535
BnaA01g26480D
BnaA01g26480D protein.
  
 
 0.503
BnaC03g73820D
BnaC03g73820D protein.
  
 
 0.503
BnaCnng69860D
BnaCnng69860D protein.
   
 0.494
BnaA08g05030D
BnaA08g05030D protein.
      
 0.457
BnaA09g40820D
BnaA09g40820D protein.
      
 0.451
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.