STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC08g09240DBnaC08g09240D protein; Belongs to the cytochrome P450 family. (513 aa)    
Predicted Functional Partners:
BnaC02g36740D
BnaC02g36740D protein; Belongs to the cytochrome P450 family.
  
  
  0.512
BnaA05g15770D
BnaA05g15770D protein; Belongs to the cytochrome P450 family.
  
  
  0.494
BnaC03g41400D
BnaC03g41400D protein; Belongs to the cytochrome P450 family.
  
  
  0.483
BnaA03g58050D
BnaA03g58050D protein; Belongs to the cytochrome P450 family.
  
     0.470
BnaC08g41990D
BnaC08g41990D protein; Belongs to the cytochrome P450 family.
  
  
  0.467
BnaA09g41630D
BnaA09g41630D protein; Belongs to the cytochrome P450 family.
  
  
  0.465
BnaA06g16100D
BnaA06g16100D protein.
      
 0.461
BnaC05g26680D
BnaC05g26680D protein; Belongs to the cytochrome P450 family.
  
  
  0.455
BnaA09g16780D
BnaA09g16780D protein; Belongs to the cytochrome P450 family.
  
  
  0.444
BnaA06g33050D
BnaA06g33050D protein; Belongs to the cytochrome P450 family.
  
  
  0.442
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.