STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g29720DBnaC02g29720D protein. (359 aa)    
Predicted Functional Partners:
BnaC03g73190D
BnaC03g73190D protein.
  
 
 0.990
BnaA02g04740D
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.988
BnaC09g39060D
BnaC09g39060D protein.
  
 
 0.985
BnaA04g05330D
BnaA04g05330D protein.
   
 0.985
BnaC06g14370D
BnaC06g14370D protein.
   
 0.984
BnaC04g08700D
BnaC04g08700D protein.
   
 0.982
BnaA09g35340D
BnaA09g35340D protein.
   
 0.980
BnaA02g16870D
BnaA02g16870D protein.
   
 0.980
BnaC05g48450D
BnaC05g48450D protein.
   
 0.974
BnaC04g56360D
BnaC04g56360D protein.
   
 0.974
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.