STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g59750DBnaC03g59750D protein. (170 aa)    
Predicted Functional Partners:
BnaCnng26630D
BnaCnng26630D protein.
  
     0.538
BnaC09g38500D
BnaC09g38500D protein.
  
     0.533
BnaC02g25440D
BnaC02g25440D protein.
  
     0.533
BnaAnng26280D
BnaAnng26280D protein.
  
     0.533
BnaUnng03030D
BnaUnng03030D protein; Belongs to the leguminous lectin family.
  
     0.530
BnaA08g26340D
BnaA08g26340D protein.
  
     0.529
BnaA02g19090D
BnaA02g19090D protein.
  
     0.525
BnaC03g65060D
BnaC03g65060D protein.
  
     0.524
BnaCnng53540D
BnaCnng53540D protein.
  
     0.524
BnaCnng03500D
BnaCnng03500D protein.
  
     0.523
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.