STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g60530DBnaC03g60530D protein. (120 aa)    
Predicted Functional Partners:
BnaC03g27330D
BnaC03g27330D protein.
  
  
 0.937
BnaA03g52900D
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.937
BnaC03g74400D
DNA helicase; Belongs to the MCM family.
   
 
 0.849
BnaC01g30580D
BnaC01g30580D protein.
   
 0.836
BnaA06g32440D
BnaA06g32440D protein.
   
 0.836
BnaC02g36630D
BnaC02g36630D protein.
   
 0.836
BnaA09g16580D
BnaA09g16580D protein.
   
 0.836
BnaA02g28570D
BnaA02g28570D protein.
   
 0.836
BnaC03g59420D
BnaC03g59420D protein.
   
 0.836
BnaC03g59410D
BnaC03g59410D protein.
   
 0.836
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.