Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC08g08960DBnaC08g08960D protein; Belongs to the protein kinase superfamily. (379 aa)    
Predicted Functional Partners:
BnaC01g23130D
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
  
 
  0.493
BnaA09g04890D
BnaA09g04890D protein.
  
  0.475
BnaC03g66160D
BnaC03g66160D protein.
   
 0.471
BnaA03g52790D
BnaA03g52790D protein.
   
 0.471
BnaC05g03130D
BnaC05g03130D protein; Belongs to the protein kinase superfamily.
  
  
  0.468
BnaC03g16550D
BnaC03g16550D protein.
  
  
 0.467
BnaC03g40790D
BnaC03g40790D protein.
  
  0.464
BnaA01g26270D
BnaA01g26270D protein.
  
  0.462
BnaC04g24880D
BnaC04g24880D protein.
  
  0.461
BnaA08g02570D
BnaA08g02570D protein.
  
  0.460
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.