STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC04g26460DBnaC04g26460D protein; Belongs to the protein kinase superfamily. (304 aa)    
Predicted Functional Partners:
BnaA04g16160D
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.952
BnaC03g77050D
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.952
BnaA03g00900D
BnaA03g00900D protein.
   
 0.951
BnaCnng67410D
BnaCnng67410D protein.
   
 0.951
BnaC03g70510D
BnaC03g70510D protein.
    
 0.920
BnaA09g51090D
BnaA09g51090D protein; Belongs to the protein kinase superfamily.
  
0.919
BnaC08g45910D
BnaC08g45910D protein; Belongs to the protein kinase superfamily.
  
0.919
BnaA04g11880D
BnaA04g11880D protein; Belongs to the PI3/PI4-kinase family.
    
 0.918
BnaC05g05060D
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
 0.915
BnaAnng36920D
BnaAnng36920D protein.
   
 0.915
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.