STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC06g14550DBnaC06g14550D protein; Belongs to the cytochrome P450 family. (500 aa)    
Predicted Functional Partners:
BnaA02g12290D
BnaA02g12290D protein.
   
 0.536
BnaCnng07790D
BnaCnng07790D protein; Belongs to the cytochrome P450 family.
  
  
  0.530
BnaC07g32930D
BnaC07g32930D protein; Belongs to the cytochrome P450 family.
  
  
  0.526
BnaA08g03170D
BnaA08g03170D protein; Belongs to the cytochrome P450 family.
  
  
  0.524
BnaC03g75250D
BnaC03g75250D protein.
  
  
  0.500
BnaA09g42330D
BnaA09g42330D protein; Belongs to the cytochrome P450 family.
  
  
  0.483
BnaC09g11590D
BnaC09g11590D protein.
    
 
 0.482
BnaAnng32710D
BnaAnng32710D protein.
    
 
 0.482
BnaC03g30530D
BnaC03g30530D protein.
      
 0.465
BnaA06g37330D
BnaA06g37330D protein.
    
 0.438
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.