STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g44460DBnaC03g44460D protein; Belongs to the disease resistance NB-LRR family. (937 aa)    
Predicted Functional Partners:
BnaC04g05010D
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.493
BnaCnng12820D
BnaCnng12820D protein.
   
   0.461
BnaA04g15990D
BnaA04g15990D protein.
    
   0.455
BnaCnng12500D
BnaCnng12500D protein.
    
   0.455
BnaC02g45730D
BnaA02g13090D protein.
    
   0.455
BnaA08g30400D
BnaA08g30400D protein.
    
   0.455
BnaC04g55940D
BnaC04g55940D protein; Belongs to the complex I 75 kDa subunit family.
    
   0.455
BnaA02g34960D
BnaA02g34960D protein; Belongs to the complex I 20 kDa subunit family.
    
   0.455
nad4L
NADH dehydrogenase subunit 4L.
    
   0.455
BnaCnng12530D
BnaCnng12530D protein.
    
   0.429
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.