STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g02460DBnaC02g02460D protein. (383 aa)    
Predicted Functional Partners:
BnaA07g24720D
BnaA07g24720D protein.
      
 0.491
BnaA03g46610D
BnaA03g46610D protein.
      
 0.485
BnaA03g46630D
BnaA03g46630D protein.
      
 0.485
BnaCnng77150D
BnaCnng77150D protein.
      
 0.485
BnaCnng77140D
BnaCnng77140D protein.
      
 0.485
BnaC06g14160D
BnaC06g14160D protein.
      
 0.465
BnaC06g14150D
BnaC06g14150D protein.
      
 0.465
BnaC08g21810D
BnaC08g21810D protein.
      
 0.443
BnaAnng03640D
BnaAnng03640D protein.
      
 0.443
BnaCnng08510D
BnaCnng08510D protein.
      
 0.443
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.