Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA06g32700DBnaA06g32700D protein; Belongs to the protein kinase superfamily. (377 aa)    
Predicted Functional Partners:
BnaA05g28210D
BnaA05g28210D protein.
   
 
 0.559
BnaAnng28450D
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
  
 
 0.536
BnaCnng41420D
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
  
 
 0.535
BnaCnng59780D
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
  
 
 0.535
BnaA05g09600D
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
  
 
 0.532
BnaA04g20000D
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
  
 
 0.530
BnaC04g44390D
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
  
 
 0.530
BnaC03g59010D
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
  
 
 0.445
BnaC04g29530D
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
      
 0.434
BnaA04g07280D
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
      
 0.434
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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