Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g07130DBnaA10g07130D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1000 aa)    
Predicted Functional Partners:
BnaA01g06670D
BnaA01g06670D protein.
     
 0.954
BnaC02g34410D
BnaC02g34410D protein.
  
  
 
0.903
BnaA02g10040D
BnaA02g10040D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
  
 
0.900
BnaA04g13330D
BnaA04g13330D protein.
     
 0.856
BnaAnng04050D
BnaAnng04050D protein.
     
 0.848
BnaA03g54250D
BnaA03g54250D protein.
     
 0.830
BnaA08g15770D
BnaA08g15770D protein.
     
 0.830
BnaC08g40250D
BnaC08g40250D protein.
     
 0.819
BnaA09g46190D
BnaA09g46190D protein.
     
 0.819
BnaC01g30380D
BnaC01g30380D protein.
     
 0.819
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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