STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g28940DBnaA09g28940D protein. (179 aa)    
Predicted Functional Partners:
BnaC02g25410D
Enhancer of polycomb-like protein.
     
 0.561
BnaA07g38490D
Enhancer of polycomb-like protein.
     
 0.561
BnaA02g36220D
Enhancer of polycomb-like protein.
     
 0.561
BnaC04g51430D
BnaC04g51430D protein.
    
  0.554
BnaA04g26950D
BnaA04g26950D protein.
    
  0.554
BnaC04g52380D
BnaC04g52380D protein.
    
  0.554
BnaC01g40730D
BnaC01g40730D protein; Belongs to the PI3/PI4-kinase family.
     
 0.550
BnaA03g01340D
Enhancer of polycomb-like protein.
     
 0.549
BnaC02g02630D
Enhancer of polycomb-like protein.
     
 0.549
BnaC07g12260D
BnaC07g12260D protein.
  
  
 
0.547
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.