STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g02900DBnaC02g02900D protein. (179 aa)    
Predicted Functional Partners:
BnaA02g04740D
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.894
BnaCnng15850D
BnaCnng15850D protein.
    
   0.891
BnaAnng10790D
BnaAnng10790D protein.
   
 
 0.890
BnaA09g55440D
BnaA09g55440D protein.
   
 
 0.886
BnaCnng28550D
BnaCnng28550D protein.
   
 
 0.880
BnaC09g39060D
BnaC09g39060D protein.
   
   0.868
BnaC08g43520D
BnaC08g43520D protein.
   
 
 0.865
BnaA06g19360D
BnaA01g34130D protein; Belongs to the universal ribosomal protein uL16 family.
   
 0.860
BnaA01g34120D
BnaA01g34120D protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.860
BnaA06g11340D
BnaA06g11340D protein.
   
 
 0.857
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.