STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC04g48010DBnaC04g48010D protein. (353 aa)    
Predicted Functional Partners:
BnaC03g41990D
BnaC03g41990D protein; Belongs to the protein kinase superfamily.
  
 0.556
BnaA07g37480D
BnaA07g37480D protein.
  
 
  0.480
BnaA08g28110D
BnaA08g28110D protein.
  
 
  0.474
BnaC02g19610D
BnaC02g19610D protein.
  
 
  0.468
BnaC07g49720D
BnaC07g49720D protein; Belongs to the protein kinase superfamily.
  
 
  0.467
BnaA09g44200D
BnaA09g44200D protein.
  
 
  0.466
BnaCnng11260D
BnaCnng11260D protein.
  
 
  0.464
BnaAnng39330D
BnaAnng39330D protein.
  
 
  0.461
BnaCnng75560D
BnaCnng75560D protein.
  
 
  0.457
BnaC08g11760D
BnaC08g11760D protein.
    
  0.456
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.