Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC04g47840DBnaC04g47840D protein. (418 aa)    
Predicted Functional Partners:
BnaC03g64840D
BnaC03g64840D protein.
   
  0.729
BnaA03g46230D
BnaA03g46230D protein.
    
  0.725
BnaA03g46220D
BnaA03g46220D protein.
    
  0.725
BnaA01g13400D
BnaA01g13400D protein.
    
  0.725
BnaA02g13790D
BnaA02g13790D protein.
   
 
 0.723
ER_gA
Erecta leucine-rich-repeat receptor-like kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
   
   0.720
BnaA06g35070D
BnaA06g35070D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.714
BnaC09g41870D
BnaC09g41870D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.714
BnaA01g05970D
BnaA01g05970D protein.
    
  0.714
BnaAnng05800D
BnaAnng05800D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.714
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (10%) [HD]