Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA08g02570DBnaA08g02570D protein. (596 aa)    
Predicted Functional Partners:
BnaA07g00650D
BnaA07g00650D protein.
   
 0.842
BnaA10g07130D
BnaA10g07130D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.668
BnaC02g34410D
BnaC02g34410D protein.
    
  0.668
BnaA02g10040D
BnaA02g10040D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 
0.668
BnaC02g06690D
Glutamine synthetase.
     
 0.662
BnaC09g41340D
Glutamine synthetase.
     
 0.662
BnaC06g02010D
Glutamine synthetase.
    
 0.660
BnaC09g12490D
BnaC09g12490D protein.
   
 
  0.654
BnaA03g47120D
BnaA03g47120D protein.
   
 
  0.654
BnaA09g44270D
BnaA09g44270D protein.
   
 
  0.654
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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