STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g25250DBnaC02g25250D protein. (190 aa)    
Predicted Functional Partners:
BnaCnng71510D
BnaCnng71510D protein.
  
   
 0.518
BnaA09g14960D
BnaA09g14960D protein.
  
   
 0.515
BnaA02g36490D
Methyltransferase.
  
     0.511
BnaA04g26390D
Methyltransferase.
  
     0.510
BnaC04g04460D
Methyltransferase.
  
     0.509
BnaC03g13900D
BnaC03g13900D protein.
  
     0.508
BnaUnng00150D
BnaUnng00150D protein.
  
     0.508
BnaCnng46380D
BnaCnng46380D protein.
  
     0.508
BnaC03g77770D
BnaC03g77770D protein.
  
     0.506
BnaA04g12150D
BnaA04g12150D protein.
  
     0.505
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.