STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g22750DBnaA02g22750D protein; Belongs to the terpene synthase family. (488 aa)    
Predicted Functional Partners:
BnaA01g14510D
BnaA01g14510D protein.
  
     0.505
BnaA03g00710D
BnaA03g00710D protein.
  
     0.499
BnaC06g04190D
BnaC06g04190D protein.
  
     0.491
BnaA09g46090D
BnaA09g46090D protein.
  
     0.491
BnaA09g46080D
BnaA09g46080D protein.
  
     0.487
BnaCnng42470D
BnaCnng42470D protein.
  
     0.487
BnaA09g46050D
BnaA09g46050D protein.
  
     0.486
BnaA06g19800D
BnaA06g19800D protein.
  
     0.485
BnaA10g08360D
BnaA10g08360D protein.
  
     0.482
BnaCnng45510D
BnaCnng45510D protein.
  
     0.482
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.