STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA04g12640DBnaA04g12640D protein. (1068 aa)    
Predicted Functional Partners:
BnaAnng06670D
BnaAnng06670D protein.
  
  
 0.597
BnaC04g37040D
BnaC04g37040D protein.
  
   
 0.588
BnaCnng63140D
BnaCnng63140D protein.
  
 
 
 0.577
BnaUnng04930D
BnaUnng04930D protein.
  
 
 
 0.574
BnaA03g52020D
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
   
 
 0.567
BnaA02g33990D
BnaA02g33990D protein.
  
 
 
 0.554
BnaA09g10130D
BnaA09g10130D protein.
  
   
 0.545
BnaA07g00070D
BnaA07g00070D protein.
  
   
 0.544
BnaA08g25140D
BnaA08g25140D protein.
  
     0.500
BnaA06g23700D
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
   
 
 0.499
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.