STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA06g34390DBnaA06g34390D protein. (444 aa)    
Predicted Functional Partners:
BnaC04g00780D
BnaC04g00780D protein.
    
 0.691
BnaA08g15740D
BnaA08g15740D protein; Belongs to the GRAS family.
    
 
 0.665
BnaA02g12860D
BnaA02g12860D protein.
    
 0.653
BnaA08g06910D
BnaA08g06910D protein.
    
 
 0.653
BnaA06g35880D
BnaA06g35880D protein; Belongs to the syntaxin family.
      
 0.649
BnaA02g13010D
BnaA02g13010D protein.
      
 0.648
BnaA08g26390D
BnaA08g26390D protein.
      
 0.648
BnaA07g00650D
BnaA07g00650D protein.
    
 0.517
BnaA03g18330D
BnaA03g18330D protein.
    
 0.512
BnaC03g21850D
BnaC03g21850D protein.
    
 0.512
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.