STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA08g28920DBnaA08g28920D protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (498 aa)    
Predicted Functional Partners:
BnaC09g39010D
BnaC09g39010D protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
     0.533
BnaA05g32010D
BnaA05g32010D protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
     0.506
BnaA09g17710D
BnaA09g17710D protein.
      
 0.483
BnaA09g15180D
BnaA09g15180D protein.
      
 0.477
BnaA01g19420D
BnaA01g19420D protein.
  
     0.473
BnaC05g19740D
BnaC05g19740D protein.
      
 0.465
BnaA09g29460D
BnaA09g29460D protein.
      
 0.465
BnaA08g20050D
BnaA08g20050D protein.
      
 0.465
BnaCnng67560D
BnaCnng67560D protein.
      
 0.465
BnaC05g05080D
BnaC05g05080D protein.
      
 0.400
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.