STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC01g22990DBnaC01g22990D protein. (76 aa)    
Predicted Functional Partners:
BnaC03g49030D
BnaC03g49030D protein.
  
     0.530
BnaA07g04520D
BnaA07g04520D protein.
  
     0.520
BnaAnng02390D
BnaAnng02390D protein.
  
     0.514
BnaC05g44160D
BnaC05g44160D protein.
  
     0.511
BnaA10g17300D
BnaA10g17300D protein.
  
     0.507
BnaAnng38970D
BnaAnng38970D protein.
  
     0.504
BnaA07g07700D
BnaA07g07700D protein.
  
     0.502
BnaA09g51270D
BnaA09g51270D protein.
  
     0.497
BnaA10g06750D
BnaA10g06750D protein.
  
   
 0.490
BnaA01g06130D
BnaA01g06130D protein.
  
     0.490
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.