STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA02g12210DBnaA02g12210D protein. (138 aa)    
Predicted Functional Partners:
BnaA06g20320D
BnaA06g20320D protein.
  
     0.538
BnaC03g75010D
BnaC03g75010D protein.
  
     0.538
BnaCnng17660D
BnaCnng17660D protein.
  
     0.533
BnaC02g41880D
BnaC02g41880D protein.
  
     0.531
BnaC05g07760D
BnaC05g07760D protein.
  
     0.519
BnaA06g20330D
BnaA06g20330D protein.
  
     0.505
BnaCnng76950D
BnaCnng76950D protein.
  
     0.504
BnaAnng20490D
BnaAnng20490D protein.
   
  
 0.481
BnaA09g01870D
BnaA09g01870D protein.
  
     0.477
BnaA09g45150D
BnaA09g45150D protein.
   
  
 0.475
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.