STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA08g02750DBnaA08g02750D protein. (440 aa)    
Predicted Functional Partners:
BnaAnng26460D
BnaAnng26460D protein.
  
 0.917
BnaC05g15760D
BnaC05g15760D protein.
  
 0.890
BnaA09g38720D
BnaA09g38720D protein.
  
 0.890
BnaC04g22010D
BnaC04g22010D protein.
  
 0.890
BnaCnng31120D
BnaCnng31120D protein.
  
 0.890
BnaCnng31080D
BnaCnng31080D protein.
  
 0.890
BnaC07g33090D
BnaC07g33090D protein.
  
 0.888
BnaC05g26310D
BnaC05g26310D protein.
  
 0.888
BnaA08g25590D
BnaA08g25590D protein.
  
 0.888
BnaC08g14510D
BnaC08g14510D protein.
  
 0.888
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.