STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC08g40750DBnaC08g40750D protein. (292 aa)    
Predicted Functional Partners:
BnaC03g64440D
BnaC03g64440D protein.
  
     0.532
BnaCnng67920D
BnaCnng67920D protein.
  
     0.531
BnaA03g58570D
BnaA03g58570D protein.
  
     0.530
BnaCnng56790D
BnaCnng56790D protein.
  
     0.530
BnaUnng03510D
BnaUnng03510D protein.
  
     0.528
BnaC03g63990D
BnaC03g63990D protein.
  
     0.527
BnaA03g58580D
BnaA03g58580D protein.
  
     0.526
BnaA08g01830D
BnaA08g01830D protein.
  
     0.525
BnaA01g23970D
BnaA01g23970D protein.
  
     0.524
BnaA06g24490D
BnaA06g24490D protein.
  
     0.523
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.