STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA08g03600DBnaA08g03600D protein. (86 aa)    
Predicted Functional Partners:
BnaC01g10050D
BnaC01g10050D protein.
  
   
 0.629
BnaC09g23700D
BnaC09g23700D protein.
  
  
 0.622
BnaC09g14300D
BnaC09g14300D protein.
  
     0.530
BnaA09g14000D
BnaA09g14000D protein.
  
     0.528
BnaC06g27820D
BnaC06g27820D protein.
  
     0.528
BnaC06g07430D
BnaC06g07430D protein.
  
    0.526
BnaA02g18990D
BnaA02g18990D protein.
  
     0.525
BnaA08g29120D
BnaA08g29120D protein.
  
     0.524
BnaA09g43100D
BnaA09g43100D protein.
  
   
 0.522
BnaA06g35000D
BnaA06g35000D protein.
  
     0.522
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.