STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC06g00050DBnaC06g00050D protein. (329 aa)    
Predicted Functional Partners:
BnaA06g20080D
BnaA06g20080D protein.
  
   
 0.666
BnaC09g37090D
BnaC09g37090D protein.
  
   
 0.583
BnaA02g05090D
BnaA02g05090D protein.
  
   
 0.582
BnaC05g49350D
BnaC05g49350D protein.
      
 0.514
BnaAnng30080D
BnaAnng30080D protein.
      
 0.503
BnaC07g49760D
BnaC07g49760D protein.
     
 0.498
BnaC09g36700D
BnaC09g36700D protein.
      
 0.473
BnaC07g27520D
BnaC07g27520D protein.
      
 0.472
BnaA03g49040D
Diacylglycerol kinase.
      
 0.469
BnaA01g14430D
BnaA01g14430D protein.
      
 0.469
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.