STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g10350DBnaA10g10350D protein. (443 aa)    
Predicted Functional Partners:
BnaA06g23680D
BnaA06g23680D protein.
  
   
 0.468
BnaA03g12240D
BnaA03g12240D protein.
  
   
 0.440
BnaA02g10250D
BnaA02g10250D protein.
  
   
 0.432
BnaCnng59300D
BnaCnng59300D protein.
  
   
 0.430
BnaC09g41940D
BnaC09g41940D protein.
      
 0.429
BnaC09g29830D
BnaC09g29830D protein.
  
   
 0.428
BnaC03g15010D
BnaC03g15010D protein.
  
   
 0.423
BnaA10g06780D
BnaA10g06780D protein.
  
   
 0.416
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.