STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g65340DBnaC03g65340D protein. (507 aa)    
Predicted Functional Partners:
BnaA07g04030D
BnaA07g04030D protein.
    
 0.888
BnaA06g40640D
BnaA06g40640D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
0.796
BnaC01g40660D
BnaC01g40660D protein; Belongs to the protein kinase superfamily.
    
0.796
BnaC02g28720D
BnaC02g28720D protein.
      
 0.787
BnaA08g07100D
BnaA08g07100D protein.
  
 0.751
BnaCnng48170D
BnaCnng48170D protein.
  
 0.751
BnaC03g62810D
BnaC03g62810D protein; Belongs to the protein kinase superfamily.
    
 
 0.743
BnaA08g11770D
BnaA08g11770D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
0.718
BnaA03g52520D
BnaA03g52520D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
0.717
BnaAnng09800D
BnaAnng09800D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
0.717
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: medium (46%) [HD]