STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g09560DBnaA10g09560D protein. (591 aa)    
Predicted Functional Partners:
BnaA07g00650D
BnaA07g00650D protein.
   
 
 0.722
BnaC08g40840D
BnaC08g40840D protein.
   
 
 0.677
BnaC05g09200D
BnaC05g09200D protein.
   
 
 0.677
BnaA09g46770D
BnaA09g46770D protein.
   
 
 0.677
BnaA01g24900D
BnaA01g24900D protein.
   
 
 0.677
BnaCnng47790D
BnaCnng47790D protein.
   
 
 0.677
BnaCnng47800D
BnaCnng47800D protein.
   
 
 0.677
BnaCnng69180D
BnaCnng69180D protein.
   
 
 0.677
BnaCnng69170D
BnaCnng69170D protein.
   
 
 0.677
BnaA06g20800D
BnaA06g20800D protein; Belongs to the PI3/PI4-kinase family.
    
 0.568
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.