Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC08g21540DBnaC08g21540D protein. (182 aa)    
Predicted Functional Partners:
BnaC06g10490D
BnaC06g10490D protein.
  
     0.500
BnaA05g14020D
BnaA05g14020D protein.
  
     0.497
BnaA02g34310D
BnaA02g34310D protein.
  
     0.472
BnaC02g43230D
BnaC02g43230D protein.
  
     0.471
BnaCnng02640D
BnaCnng02640D protein.
  
     0.446
BnaAnng33740D
BnaAnng33740D protein.
  
     0.446
BnaA09g47230D
BnaA09g47230D protein.
  
     0.443
BnaC04g53350D
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.431
BnaC03g34360D
BnaC03g34360D protein.
  
 
  0.427
BnaC03g33890D
BnaC03g33890D protein.
  
     0.425
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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