Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA04g18600DBnaA04g18600D protein. (638 aa)    
Predicted Functional Partners:
WRKY53
WRKY transcription factor 53.1.
   
  
 0.770
BnaAnng06480D
BnaAnng06480D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
 
0.766
BnaCnng04870D
BnaCnng04870D protein.
    
  0.732
BnaC04g12170D
BnaC04g12170D protein.
   
 0.713
BnaCnng45760D
BnaCnng45760D protein.
      
 0.706
BnaA07g25430D
BnaA07g25430D protein.
      
 0.701
BnaC07g15800D
BnaC07g15800D protein.
    
 
 0.699
BnaA01g22490D
BnaA01g22490D protein.
  
 
 
0.691
BnaC01g28700D
BnaC01g28700D protein.
  
 
 
0.690
BnaA09g06200D
BnaA09g06200D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.688
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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