Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BnaA01g14420D | BnaA02g24150D | A0A078HA16 | A0A078IHP2 | BnaA01g14420D protein. | BnaA02g24150D protein. | 0.862 |
BnaA01g14420D | BnaA03g47110D | A0A078HA16 | A0A078FDJ9 | BnaA01g14420D protein. | BnaA03g47110D protein. | 0.900 |
BnaA01g14420D | BnaA03g58320D | A0A078HA16 | A0A078J150 | BnaA01g14420D protein. | Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family. | 0.985 |
BnaA01g14420D | BnaA06g35210D | A0A078HA16 | A0A078FY41 | BnaA01g14420D protein. | BnaA06g35210D protein. | 0.704 |
BnaA01g14420D | BnaA09g51390D | A0A078HA16 | A0A078H4P7 | BnaA01g14420D protein. | BnaA09g51390D protein. | 0.487 |
BnaA01g14420D | BnaC05g01120D | A0A078HA16 | A0A078FSF5 | BnaA01g14420D protein. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.759 |
BnaA02g24150D | BnaA01g14420D | A0A078IHP2 | A0A078HA16 | BnaA02g24150D protein. | BnaA01g14420D protein. | 0.862 |
BnaA02g24150D | BnaA03g47110D | A0A078IHP2 | A0A078FDJ9 | BnaA02g24150D protein. | BnaA03g47110D protein. | 0.860 |
BnaA02g24150D | BnaA04g17950D | A0A078IHP2 | A0A078GWR5 | BnaA02g24150D protein. | Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family. | 0.811 |
BnaA02g24150D | BnaA06g35210D | A0A078IHP2 | A0A078FY41 | BnaA02g24150D protein. | BnaA06g35210D protein. | 0.960 |
BnaA02g24150D | BnaA09g51390D | A0A078IHP2 | A0A078H4P7 | BnaA02g24150D protein. | BnaA09g51390D protein. | 0.819 |
BnaA02g24150D | BnaC04g13690D | A0A078IHP2 | A0A078IAD7 | BnaA02g24150D protein. | BnaC04g13690D protein. | 0.811 |
BnaA02g24150D | BnaC04g13700D | A0A078IHP2 | A0A078ID39 | BnaA02g24150D protein. | BnaC04g13700D protein. | 0.811 |
BnaA02g24150D | BnaC05g01120D | A0A078IHP2 | A0A078FSF5 | BnaA02g24150D protein. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.819 |
BnaA03g47110D | BnaA01g14420D | A0A078FDJ9 | A0A078HA16 | BnaA03g47110D protein. | BnaA01g14420D protein. | 0.900 |
BnaA03g47110D | BnaA02g24150D | A0A078FDJ9 | A0A078IHP2 | BnaA03g47110D protein. | BnaA02g24150D protein. | 0.860 |
BnaA03g47110D | BnaA03g58320D | A0A078FDJ9 | A0A078J150 | BnaA03g47110D protein. | Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family. | 0.985 |
BnaA03g47110D | BnaA06g35210D | A0A078FDJ9 | A0A078FY41 | BnaA03g47110D protein. | BnaA06g35210D protein. | 0.704 |
BnaA03g47110D | BnaA09g51390D | A0A078FDJ9 | A0A078H4P7 | BnaA03g47110D protein. | BnaA09g51390D protein. | 0.487 |
BnaA03g47110D | BnaC05g01120D | A0A078FDJ9 | A0A078FSF5 | BnaA03g47110D protein. | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.759 |
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