STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC07g04130DBnaC07g04130D protein. (84 aa)    
Predicted Functional Partners:
BnaC05g02460D
BnaC05g02460D protein.
  
     0.509
BnaA10g27990D
BnaA10g27990D protein.
  
     0.507
BnaC04g28860D
BnaC04g28860D protein.
  
     0.495
BnaC03g16830D
BnaC03g16830D protein.
  
     0.493
BnaA08g02150D
BnaA08g02150D protein.
  
     0.488
BnaA03g49680D
BnaA03g49680D protein.
  
     0.480
BnaAnng02570D
BnaAnng02570D protein.
  
     0.475
BnaA08g30990D
BnaA08g30990D protein.
  
     0.474
BnaAnng02350D
BnaAnng02350D protein.
  
     0.470
BnaAnng05030D
BnaAnng05030D protein.
  
     0.469
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.