STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng02640DBnaAnng02640D protein. (119 aa)    
Predicted Functional Partners:
BnaC03g13820D
BnaC03g13820D protein.
   
  
 0.486
BnaA03g11050D
BnaA03g11050D protein.
   
  
 0.486
BnaAnng20980D
BnaAnng20980D protein.
      
 0.473
BnaC05g23600D
BnaC05g23600D protein.
      
 0.459
BnaA10g10330D
BnaA10g10330D protein.
   
  
 0.447
BnaA04g05850D
BnaA04g05850D protein.
      
 0.418
BnaA09g03360D
BnaA09g03360D protein.
      
 0.418
BnaC08g46890D
BnaC08g46890D protein.
      
 0.406
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.