STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA01g28070DBnaA01g28070D protein. (424 aa)    
Predicted Functional Partners:
BnaC03g13570D
BnaC03g13570D protein.
   
 0.719
BnaA10g10600D
BnaA10g10600D protein.
   
 0.719
BnaA03g10900D
BnaA03g10900D protein.
   
 0.719
BnaCnng14010D
BnaCnng14010D protein.
   
 0.719
BnaC04g52760D
BnaC04g52760D protein.
   
 0.719
BnaA09g05810D
BnaA09g05810D protein.
    
 0.618
BnaAnng07040D
BnaAnng07040D protein.
    
 0.618
BnaAnng07030D
BnaAnng07030D protein.
    
 0.618
BnaAnng40540D
BnaAnng40540D protein.
    
 0.618
BnaC06g30230D
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.594
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.