STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA09g07130DBnaA09g07130D protein. (225 aa)    
Predicted Functional Partners:
BnaA09g08180D
BnaA09g08180D protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.798
BnaA02g34890D
BnaA02g34890D protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.798
BnaC02g45110D
BnaC02g45110D protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.798
BnaA02g34040D
BnaA02g34040D protein; Belongs to the PI3/PI4-kinase family.
    
 0.643
BnaC02g42900D
BnaC02g42900D protein; Belongs to the PI3/PI4-kinase family.
    
 0.643
BnaA06g23220D
BnaA06g23220D protein; Belongs to the PI3/PI4-kinase family.
    
 0.643
BnaAnng09290D
BnaAnng09290D protein.
    
 0.635
BnaCnng20060D
BnaCnng20060D protein.
    
 0.631
BnaC06g00020D
BnaC06g00020D protein.
    
 0.609
BnaC03g23090D
BnaC03g23090D protein.
    
 0.583
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.