STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC01g31810DPeroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (329 aa)    
Predicted Functional Partners:
BnaA03g51010D
BnaA03g51010D protein.
     
 0.683
BnaA05g20600D
BnaA05g20600D protein.
     
 0.660
BnaA06g40660D
BnaA06g40660D protein.
     
 0.656
BnaC07g03240D
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
     
  0.650
BnaA10g07250D
BnaA10g07250D protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
     
  0.650
BnaA09g42930D
BnaA09g42930D protein.
     
  0.650
BnaA10g07270D
Caffeic O-methyltransferase 1-5; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
     
  0.650
BnaC09g30540D
BnaC09g30520D protein.
     
  0.650
BnaC09g30560D
Caffeic O-methyltransferase 1-10; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
     
  0.650
BnaC01g20290D
BnaC01g20290D protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
     
  0.650
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.